In Depth Variant Analysis: c.415C>T (p.Arg139Trp)

  c.415C>T
p.Arg139Trp (Legacy AA No. 79)
Mutation Type:
Point
Domain:
EGF1
Codon Change:
CGG > TGG
Mutation Effect:
Missense
Location:
Exon(5)
No of bases:
1
No. of patients reported:
1

Patient Information : Show

Residue Information :

  Name Type Cyclic Size Hydrophobicity Charge
Wild Type
Arg
basic
acyclic
large
hydrophilic
postive
Mutated
Trp
aromatic
cyclic
large
hydrophobic
neutral

Substitution Analysis :

  • Grantham Score : 101
  • PolyPhen-2 Prediction : probably damaging (Probability: 1)
  • SIFT Prediction :Damaging (SCORE: 0.002)
  • PROVEAN (Protein Variation Effect Analyzer) Prediction : Deleterious (SCORE: -5.51)

  • Structural Implications :

  • Arg139 is shown below as a red sphere.
  • Arg139 is an exposed residue(the surface accessibility from the FVII structure is 9).
  • Arg139 is in a random coil area of the FVII structure (the DSSP assignment from the modelled FVII domains is T).

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    Factor VII Variant Database