In Depth Variant Analysis: c.362G>T (p.Cys121Phe)

  c.362G>T
p.Cys121Phe (Legacy AA No. 61)
Mutation Type:
Point
Domain:
EGF1
Codon Change:
TGC > TTC
Mutation Effect:
Missense
Location:
Exon(5)
No of bases:
1
No. of patients reported:
1

Patient Information : Show

Residue Information :

  Name Type Cyclic Size Hydrophobicity Charge
Wild Type
Cys
-
acyclic
medium
hydrophilic
neutral
Mutated
Phe
aromatic
cyclic
large
hydrophobic
neutral

Substitution Analysis :

  • Grantham Score : 205
  • PolyPhen-2 Prediction : probably damaging (Probability: 1)
  • SIFT Prediction :Damaging (SCORE: 0.000)
  • PROVEAN (Protein Variation Effect Analyzer) Prediction : Deleterious (SCORE: -10.19)

  • Structural Implications :

  • Cys121 is shown below as a red sphere.
  • Cys121 is an exposed residue(the surface accessibility from the FVII structure is 3).
  • Cys121is in a region of secondary structure within the FVII domains (the DSSP assignment from the modelled FVII domains is E).
  • The substitution involves a conserved cysteine residue that forms a disulphide bridge. Breakage of this disulphide bridge may have serious effects on the stability of the domain.

  • Hint: Left click mouse | To rotate the structure
    Hint: Rotate mousewheel | To zoom in/out the structure
    Hint: Right click mouse | to use applet control options

    Structure details

    Structure
    Domain Colours
    Domain Labels

    Display Options

    Spin
    Style
    Color
    Disulphides
    Export

    Right Click on the molecule's screen for more options.


    NOTE: If a Java error message appears, please click the following LINK.


    Please click here to view the Database Statistics
    Factor VII Variant Database