In Depth Variant Analysis: c.358T>C (p.Ser120Pro)

  c.358T>C
p.Ser120Pro (Legacy AA No. 60)
Mutation Type:
Point
Domain:
EGF1
Codon Change:
TCC > CCC
Mutation Effect:
Missense
Location:
Exon(5)
No of bases:
1
No. of patients reported:
2

Patient Information : Show

Residue Information :

  Name Type Cyclic Size Hydrophobicity Charge
Wild Type
Ser
-
acyclic
small
hydrophilic
neutral
Mutated
Pro
-
cyclic
medium
hydrophobic
neutral

Substitution Analysis :

  • Grantham Score : 74
  • PolyPhen-2 Prediction : probably damaging (Probability: 0.99)
  • SIFT Prediction :Tolerated (SCORE: 0.178)
  • PROVEAN (Protein Variation Effect Analyzer) Prediction : Neutral (SCORE: -2.25)

  • Structural Implications :

  • Ser120 is shown below as a red sphere.
  • Ser120 is an exposed residue(the surface accessibility from the FVII structure is 7).
  • Ser120is in a region of secondary structure within the FVII domains (the DSSP assignment from the modelled FVII domains is E).
  • Ser120 is in a proposed O-linked (Fuc) site [Reference].

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    Factor VII Variant Database